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Published June 29, 2023 | Submitted + Supplemental Material
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Transgene directed induction of a stem cell-derived human embryo model

Abstract

The human embryo undergoes morphogenetic transformations following implantation into the uterus, yet our knowledge of this crucial stage is limited by the inability to observe the embryo in vivo. Stem cell-derived models of the embryo are important tools to interrogate developmental events and tissue-tissue crosstalk during these stages. Here, we establish a human post-implantation embryo model comprised of embryonic and extraembryonic tissues. We combine two types of extraembryonic-like cells generated by transcription factor overexpression with wildtype embryonic stem cells and promote their self-organization into structures that mimic aspects of the post-implantation human embryo. These self-organized aggregates contain a pluripotent epiblast-like domain surrounded by hypoblast-and trophoblast-like tissues. We demonstrate that these inducible human embryoids robustly generate several cell types, including amnion, extraembryonic mesenchyme, and primordial germ cell-like cells in response to BMP signaling. This model also allowed us to identify an inhibitory role for SOX17 in the specification of anterior hypoblast-like cells. Modulation of the subpopulations in the hypoblast-like compartment demonstrated that extraembryonic-like cells impact epiblast-like domain differentiation, highlighting functional tissue-tissue crosstalk. In conclusion, we present a modular, tractable, integrated model of the human embryo that will allow us to probe key questions of human post-implantation development, a critical window when significant numbers of pregnancies fail.

Additional Information

The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license. The authors are grateful to CARE Fertility, Herts and Essex Fertility Centre, Bourn Hall Fertility Clinic and King's Fertility Clinic for their collaboration in donation of supernumerary human embryos. The authors thank all members of the M.Z-G and Boroviak labs, Gianluca Amadei for thoughtful comments and Marta Shahbazi and David Glover for feedback on the manuscript. This work is supported by Wellcome Trust, Open Atlas and NOMIS award grants to M.Z-G, Allen Discovery Center for Cell Lineage Tracing grants to J.S. and M.Z-G., in addition to individual funding from the Gates Cambridge Trust (to B.A.T.W.) and Leverhulme Trust Early Career Fellowship (to C.W.G.). J.S. is an investigator of the Howard Hughes Medical Institute. Author Contributions. B.A.T.W. and C.W.G. designed, carried out, and analyzed experiments. B.A.T.W., C.W.G. and L.K.I-S. performed human embryo work. N.H. and R.M.D. prepared 10x multiome libraries and performed RNA and ATAC sequencing supervised by J.S.. B.A.T.W. analyzed single-cell sequencing data. C.W.G. and B.A.T.W. wrote the manuscript with input from all co-authors. M.Z-G conceived and supervised the project. Data Availability. For aligning sequencing data, GRCh38 (https://www.ncbi.nlm.nih.gov/assembly/GCF_000001405.26/) and GRCm38 (https://www.ncbi.nlm.nih.gov/assembly/GCF_000001635.20/) were used. Previously published data is publicly available: Human data: Molè et al., 2021: ArrayExpress E-MTAB-8060 Xiang et al., 2020: Gene Expression Omnibus GSE136447 Zhou et al., 2019: Gene Expression Omnibus GSE109555 Petropoulos et al., 2016: ArrayExpress E-MTAB-3929 Blakely et al., 2015: Gene Expression Omnibus GSE66507 Yan et al., 2013: Gene Expression Omnibus GSE36552 Cynomolgus Monkey: Yang et al., 2021: Gene Expression Omnibus GSE148683 Ma et al., 2019: Gene Expression Omnibus GSE130114 Nakamura et al., 2016: Gene Expression Omnibus GSE74767 Code Availability. No custom code was utilized in this manuscript. Code used to analyze these data is available at https://github.com/bweatherbee/human_model (to be made public upon publication). Competing Interest Statement. M.Z-G, B.A.T.W and C.W.G are inventors on a patent titled 'Stem Cell Derived-Model of the Human Embryo.

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Submitted - 2023.06.15.545082v1.full.pdf

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Additional details

Created:
August 20, 2023
Modified:
December 22, 2023