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Published August 9, 2021 | Submitted + Supplemental Material
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The kpc-1 (furin) 3'UTR promotes dendritic transport and local translation of mRNAs to regulate dendrite branching and self-avoidance of a nociceptive neuron

Abstract

Mechanical stimuli on the skin of C. elegans are detected by the dendritic arbors of PVD nociceptive neurons, which provide uniform sensory coverage outside the head region across the entire animal. Through genetic screens, we isolate three mutants that display profound dendrite self-avoidance defects in PVD neurons. Studying dendrite self-avoidance in C. elegans is likely to provide new mechanistic insight into the process as the well-known self-avoidance molecule Dscam is absent from the C. elegans genome. Through whole genome sequencing, we identify the responsible mutations in the kpc-1 gene. Compared to wild-type animals, a strong kpc-1 mutant allele exhibits secondary dendrite branching defects whereas a weak kpc-1 mutant allele displays tertiary dendrite self-avoidance defects. Here, we show that the kpc-1 3'UTR is required for kpc-1's functions in both dendrite branching and dendrite self-avoidance. The kpc-1 3'UTR facilitates kpc-1 RNA localization to branching points and contact points between sibling dendrites. Using fluorescence recovery after photoconversion, we show that the kpc-1 3'UTR promotes local protein synthesis in the distal segment of PVD dendrites. We identify an important secondary structural motif in the kpc-1 3'UTR required for tertiary dendrite self-avoidance. We demonstrate that over-expression of kpc-1 leads to greater self-avoidance without limiting initial dendrite outgrowth, supporting a direct role of kpc-1 in self-avoidance. Animals with dma-1 receptor over-expression display similar secondary dendrite branching and tertiary dendrite self-avoidance defects that are suppressed with kpc-1 over-expression, which suggests that DMA-1 is a potential KPC-1 target that is down-regulated by KPC-1. Our results support a model where KPC-1 proteins are synthesized at branching points and contact points between neighboring dendrites to locally down-regulate DMA-1 receptors to promote dendrite branching and self-avoidance. A recently reported Schizophrenia-associated genetic variant in the 3'UTR of the human furin gene, a homolog of kpc-1, highlights the important role of the kpc-1 (furin) 3'UTR in neuronal development, which is further demonstrated by this mechanistic study.

Additional Information

The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC 4.0 International license. This version posted August 5, 2021. This work was funded by grants from the March of Dimes Foundation (C.C.), the Whitehall Foundation Research Award (C.C.), the National Science Foundation (IOS-1455758 to C.C.), and the National Institute of General Medical Sciences of the National Institutes of Health (R01GM111320 to C.C.). We thank Oliver Hobert lab for Whole Genome Sequencing, Kana Hamada for confocal imaging protocols, Ryan Weihsiang Lin for imaging analysis, Seema Sheoran for unpublished observation, Evguenia Ivakhnitskaia for technical supports and critical reading the manuscript, the Caenorhabditis Genetics Center for the kpc-1(gk8) strain, and the WormBase for readily accessible information. Author Contributions: Y.Z. conceived, designed, performed, and analyzed experiments, and made constructs. M.S. conceived, designed, performed, and analyzed experiments, made constructs, and drafted the article. H.C. conceived, designed, performed, and analyzed experiments, and drafted the article. T.F. performed genetic screens, identified dendrite self-avoidance mutants, and analyzed experiments. N.Z. imaged and quantified green fluorescent MS2 capsid proteins in PVD dendrites. W.Z. made crispr line and contributed unpublished essential data and reagents. C.F.C. conceived, designed, and analyzed experiments. C.C. conceived, designed, analyzed and interpreted data, and drafted the article. The authors have declared no competing interest.

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Submitted - 2021.08.03.453128v1.full.pdf

Supplemental Material - media-1.pdf

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Additional details

Created:
August 20, 2023
Modified:
October 23, 2023