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Published July 1, 2021 | Supplemental Material + Submitted + Published
Journal Article Open

Binding of guide piRNA triggers methylation of the unstructured N-terminal region of Aub leading to assembly of the piRNA amplification complex

Abstract

PIWI proteins use guide piRNAs to repress selfish genomic elements, protecting the genomic integrity of gametes and ensuring the fertility of animal species. Efficient transposon repression depends on amplification of piRNA guides in the ping-pong cycle, which in Drosophila entails tight cooperation between two PIWI proteins, Aub and Ago3. Here we show that post-translational modification, symmetric dimethylarginine (sDMA), of Aub is essential for piRNA biogenesis, transposon silencing and fertility. Methylation is triggered by loading of a piRNA guide into Aub, which exposes its unstructured N-terminal region to the PRMT5 methylosome complex. Thus, sDMA modification is a signal that Aub is loaded with piRNA guide. Amplification of piRNA in the ping-pong cycle requires assembly of a tertiary complex scaffolded by Krimper, which simultaneously binds the N-terminal regions of Aub and Ago3. To promote generation of new piRNA, Krimper uses its two Tudor domains to bind Aub and Ago3 in opposite modification and piRNA-loading states. Our results reveal that post-translational modifications in unstructured regions of PIWI proteins and their binding by Tudor domains that are capable of discriminating between modification states is essential for piRNA biogenesis and silencing.

Additional Information

© The Author(s) 2021. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. Received 21 October 2020; Accepted 10 June 2021; Published 01 July 2021. We thank members of the Aravin lab for their discussion and comments. We thank the BL19U1 beamlines staff at the Shanghai Synchrotron Radiation Facility for assistance during data collection. We thank Igor Antoshechkin (Caltech) for help with sequencing. This work was supported by grants from the National Institutes of Health (R01 GM097363) and by the HHMI Faculty Scholar Award to A.A.A. and the National Natural Science Foundation of China (31870755) and the Guangdong Innovation Research Team Fund (2016ZT06S172) to S.L. Data availability: All relevant data supporting the key findings of this study are available within the article and its Supplementary Information files or from the corresponding authors upon reasonable request. The Drosophila strains that we have used in this report are also available from the corresponding authors upon reasonable request. Source data are provided with this paper. Small RNA-seq data are available on the GEO database, GSE153156. X-ray structures have been deposited in the RCSB Protein Data Bank with the accession codes: 7CFB for the eTud1 apo structure, 7CFC for the eTud1-Ago3 complex structure, and 7CFD for the eTud2-AubR15me2 structure. Source data are provided with this paper. These authors contributed equally: Xiawei Huang, Hongmiao Hu. Author Contributions: S.L. and D.J.P. conceived and supervised ITC and structural work; A.A.A. conceived and supervised all other experiments. X.H., H.H., F.Z., and A.W. performed the experiments. R.S. developed tools for the analysis of small RNA libraries. A.A.A., X.H., H.H., K.F.T., and S.L. wrote the manuscript. The authors declare no competing interests. Peer review information: Nature communications thanks Jinrong Min and other, anonymous, reviewers for their contributions to the peer review of this work. Peer review reports are available.

Attached Files

Published - s41467-021-24351-x.pdf

Submitted - 2020.07.14.203323v1.full.pdf

Supplemental Material - 41467_2021_24351_MOESM1_ESM.pdf

Supplemental Material - 41467_2021_24351_MOESM2_ESM.pdf

Supplemental Material - 41467_2021_24351_MOESM3_ESM.pdf

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Additional details

Created:
August 22, 2023
Modified:
December 22, 2023