Welcome to the new version of CaltechAUTHORS. Login is currently restricted to library staff. If you notice any issues, please email coda@library.caltech.edu
Published January 29, 2016 | Supplemental Material + Accepted Version + Published
Journal Article Open

A stochastic neuronal model predicts random search behaviors at multiple spatial scales in C. elegans

Abstract

Random search is a behavioral strategy used by organisms from bacteria to humans to locate food that is randomly distributed and undetectable at a distance. We investigated this behavior in the nematode Caenorhabditis elegans, an organism with a small, well-described nervous system. Here we formulate a mathematical model of random search abstracted from the C. elegans connectome and fit to a large-scale kinematic analysis of C. elegans behavior at submicron resolution. The model predicts behavioral effects of neuronal ablations and genetic perturbations, as well as unexpected aspects of wild type behavior. The predictive success of the model indicates that random search in C. elegans can be understood in terms of a neuronal flip-flop circuit involving reciprocal inhibition between two populations of stochastic neurons. Our findings establish a unified theoretical framework for understanding C. elegans locomotion and a testable neuronal model of random search that can be applied to other organisms.

Additional Information

© 2016 Roberts et al. This article is distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use and redistribution provided that the original author and source are credited. Received: 26 October 2015. Accepted: 19 January 2016. Published: 29 January 2016. This research was supported by a grant MH051383 from the National Institute of Mental Health to SRL. The funders had no role in study design, data collection and interpretation, or the decision to submit the work for publication. Author contributions: WMR, Modeling, Conception and design, Analysis and interpretation of data, Drafting or revising the article; SBA, Design and construction of tracking system, Acquisition of data; KJL, RAL, MCB, Behavior, Acquisition of data; THL, Electrophysiology, Acquisition of data; TRT, Neuronal ablations, Acquisition of data; EJI, Chemotaxis simulations, Analysis and interpretation of data; SF, Spotted worm tracking method, Acquisition of data; NP, CIB, Molecular biology, Contributed unpublished essential data or reagents; SRL, Modeling, Conception and design, Acquisition of data, Analysis and interpretation of data, Drafting or revising the article.

Attached Files

Published - elife-12572-v2.pdf

Accepted Version - eLife.12572.full.pdf

Supplemental Material - elife-12572-fig1-v2-download.jpg

Supplemental Material - elife-12572-fig2-v2-download.jpg

Supplemental Material - elife-12572-fig3-v2-download.jpg

Supplemental Material - elife-12572-fig4-v2-download.jpg

Supplemental Material - elife-12572-fig5-v2-download.jpg

Supplemental Material - elife-12572-fig6-v2-download.jpg

Supplemental Material - elife-12572-fig7-v2-download.jpg

Supplemental Material - elife-12572-fig8-v2-download.jpg

Supplemental Material - elife-12572-fig9-v2-download.jpg

Supplemental Material - elife-12572-media1.mp4

Supplemental Material - elife-12572-media2.mp4

Supplemental Material - elife-12572-media3.mp4

Supplemental Material - elife-12572-media4.mp4

Files

elife-12572-v2.pdf
Files (21.6 MB)
Name Size Download all
md5:35e03dbfc57e438f3e046a33dcad7353
4.4 MB Preview Download
md5:1f26f1fbe42bdb5b1c9ca82cd610a3d4
267.5 kB Preview Download
md5:eaf37a119c6856ceb141c5526724005d
384.8 kB Preview Download
md5:67e2c4f05e29c7e47b37683998b7120e
232.0 kB Preview Download
md5:4527601a95611cdb39054176b105d20f
1.5 MB Download
md5:8a455a6bf5a326bb2ac74261751f899b
1.6 MB Download
md5:a6be76ed537bbddd5ed1812de6e68967
1.4 MB Download
md5:a5d9ef5ebe8acd80e74d68148a4e0f77
1.4 MB Download
md5:84f2c8238ca3c34ed1228a6af6b0dfd3
8.6 MB Preview Download
md5:d877ea32c3c3210d34b25724553dd3e9
409.0 kB Preview Download
md5:d0b5308337dfe028e9c4f6f5b2c70d81
513.7 kB Preview Download
md5:4b83d590870101ba6fa2aaa3902c615b
70.5 kB Preview Download
md5:4d0f557a9cd8f15e5acf5ae59659cf3d
239.1 kB Preview Download
md5:0fc1ba0a2abe3cb59506122f9e731779
300.5 kB Preview Download
md5:0a03f3f23ada1479a4e4f47f44010287
292.2 kB Preview Download

Additional details

Created:
August 20, 2023
Modified:
October 23, 2023