Creating combinatorial patterns with DNA origami arrays

Abstract

DNA origami (Rothemund, 2006) and smaller DNA tiles (Winfree et al., 1998) have been used as effective scaffolds to create complex patterns for organizing molecules with nanometer precision but of a limited size. Arrays of DNA origami (Liu et al., 2011) and DNA tiles have been shown to be capable of creating patterns in a larger scale, either periodically or following a specific set of rules defined by a cellular automaton (Rothemund et al., 2004). Here we aim to create a variety of large-scale complex patterns by using a combinatorial approach with a mathematically simple and elegant rule called Truchet tiling.

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