Published March 1, 2003
| public
Journal Article
The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models
Abstract
Motivation: Molecular biotechnology now makes it possible to build elaborate systems models, but the systems biology community needs information standards if models are to be shared, evaluated and developed cooperatively. Results: We summarize the Systems Biology Markup Language (SBML) Level 1, a free, open, XML-based format for representing biochemical reaction networks. SBML is a software-independent language for describing models common to research in many areas of computational biology, including cell signaling pathways, metabolic pathways, gene regulation, and others.
Additional Information
© 2003 Oxford University Press. Received on May 17, 2002; revised on October 15, 2002; accepted on October 25, 2002. This work has been supported by: the Japan Science and Technology Corporation's ERATO Kitano Symbiotic Systems Project; an International Joint Research Grant from the NEDO/Japanese Ministry of Economy, Trade and Industry; and the Rice Genome and Simulation Project from the Japanese Ministry of Agriculture.Additional details
- Eprint ID
- 27322
- DOI
- 10.1093/bioinformatics/btg015
- Resolver ID
- CaltechAUTHORS:20111020-083352718
- Japan Science and Technology Corporation ERATO Kitano Symbiotic Systems Project
- Ministry of Economy, Trade and Industry (Japan)
- Ministry of Agriculture (Japan)
- Created
-
2011-10-24Created from EPrint's datestamp field
- Updated
-
2021-11-09Created from EPrint's last_modified field