The Structure of Isolated Synechococcus Strain WH8102 Carboxysomes as Revealed by Electron Cryotomography
Abstract
Carboxysomes are organelle-like polyhedral bodies found in cyanobacteria and many chemoautotrophic bacteria that are thought to facilitate carbon fixation. Carboxysomes are bounded by a proteinaceous outer shell and filled with ribulose 1,5-bisphosphate carboxylase/oxygenase (RuBisCO), the first enzyme in the CO_2 fixation pathway, but exactly how they enhance carbon fixation is unclear. Here we report the three-dimensional structure of purified carboxysomes from Synechococcus species strain WH8102 as revealed by electron cryotomography. We found that while the sizes of individual carboxysomes in this organism varied from 114 nm to 137 nm, surprisingly, all were approximately icosahedral. There were on average ~250 RuBisCOs per carboxysome, organized into three to four concentric layers. Some models of carboxysome function depend on specific contacts between individual RuBisCOs and the shell, but no evidence of such contacts was found: no systematic patterns of connecting densities or RuBisCO positions against the shell's presumed hexagonal lattice could be discerned, and simulations showed that packing forces alone could account for the layered organization of RuBisCOs.
Additional Information
© 2007 Elsevier Ltd. Received 3 February 2007; revised 25 May 2007; accepted 25 June 2007. Available online 29 June 2007. Edited by W. Baumeister. This work was supported by NIH grants P01 GM66521 and R01 AI067548 (to G.J.J.), DOE grant DE-FG02-04ER63785 (to G.J.J.), a Searle Scholar Award (to G.J.J.), and gifts to Caltech from the Ralph M. Parsons Foundation, the Agouron Institute, and the Gordon and Betty Moore Foundation. We thank Dr Wolfgang Baumeister's group at the Max Planck Institute for Biochemistry for the most current version of the MolMatch template matching software and Dr Hong Zhuo for discussion of heterogeneity in the sizes of icosahedral viruses, and Dr. Todd Yeates for pointing out an error in our original calculation of T numbers. Supplementary data associated with this article can be found, in the online version, at doi:10.1016/j.jmb.2007.06.059Attached Files
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Supplemental Material - IANjmb07video1.mov
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Additional details
- PMCID
- PMC2453779
- Eprint ID
- 24666
- Resolver ID
- CaltechAUTHORS:20110803-151551421
- NIH
- PO1 GM665211
- NIH
- R01 AI067548
- Department of Energy (DOE)
- DE-FG02-04ER63785
- Searle Scholars Program
- Ralph M. Parsons Foundation
- Agouron Institute
- Gordon and Betty Moore Foundation
- Created
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2011-08-03Created from EPrint's datestamp field
- Updated
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2021-11-09Created from EPrint's last_modified field