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Published February 12, 2003 | public
Journal Article

Modeling biological systems using Dynetica—a simulator of dynamic networks

Abstract

We present Dynetica, a user-friendly simulator of dynamic networks for constructing, visualizing, and analyzing kinetic models of biological systems. In addition to generic reaction networks, Dynetica facilitates construction of models of genetic networks, where many reactions are gene expression and interactions among gene products. Further, it integrates the capability of conducting both deterministic and stochastic simulations.

Additional Information

© Oxford University Press 2003. Received on April 22, 2002; revised on September 18, 2002; accepted on October 21, 2002. We thank Yi-Fan Chen for technical assistance. Funding of this work was provided by the National Science Foundation.

Additional details

Created:
August 19, 2023
Modified:
October 19, 2023