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Published February 16, 2017 | Accepted Version + Supplemental Material
Journal Article Open

MFN1 structures reveal nucleotide-triggered dimerization critical for mitochondrial fusion

Abstract

Mitochondria are double-membraned organelles with variable shapes influenced by metabolic conditions, developmental stage, and environmental stimuli. Their dynamic morphology is a result of regulated and balanced fusion and fission processes. Fusion is crucial for the health and physiological functions of mitochondria, including complementation of damaged mitochondrial DNAs and the maintenance of membrane potential. Mitofusins are dynamin-related GTPases that are essential for mitochondrial fusion. They are embedded in the mitochondrial outer membrane and thought to fuse adjacent mitochondria via combined oligomerization and GTP hydrolysis. However, the molecular mechanisms of this process remain unknown. Here we present crystal structures of engineered human MFN1 containing the GTPase domain and a helical domain during different stages of GTP hydrolysis. The helical domain is composed of elements from widely dispersed sequence regions of MFN1 and resembles the 'neck' of the bacterial dynamin-like protein. The structures reveal unique features of its catalytic machinery and explain how GTP binding induces conformational changes to promote GTPase domain dimerization in the transition state. Disruption of GTPase domain dimerization abolishes the fusogenic activity of MFN1. Moreover, a conserved aspartate residue trigger was found to affect mitochondrial elongation in MFN1, probably through a GTP-loading-dependent domain rearrangement. Thus, we propose a mechanistic model for MFN1-mediated mitochondrial tethering, and our results shed light on the molecular basis of mitochondrial fusion and mitofusin-related human neuromuscular disorders.

Additional Information

© 2017 Macmillan Publishers Limited. Received 27 July 2016; accepted 3 January 2017. Published online 23 January 2017. We thank the staff at beamline BL17U1 of SSRF for the help with the collection of diffraction data, W.-L. Huang and H.-Y. Wang for technical assistance, J. Hu and X. Guo for advice on liposome tethering assay, and O. Daumke for comments on the manuscript. This work was supported by grants of National Basic Research Program of China (2013CB910500), National Natural Science Foundation of China (31200553), Natural Science Foundation of Guangdong Province (2014TQ01R584 and 2014A030312015), New Century Excellent Talents in University (NCET-12-0567) and the Recruitment Program of Global Youth Experts to S.G., and the National Institutes of Health (GM110039 and GM119388) to D.C.C. Data availability: The X-ray crystallographic coordinates and structure factor files for MFN1IM structures have been deposited in the Protein Data Bank (PDB) under the following accession numbers: 5GO4 (apo MFNIMB), 5GOF (GTP-bound MFN1IMC(T109A)), 5GOM (transition-like state MFN1IMC), and 5GOE (GDP-bound MFN1IMC(T109A)). All other data generated or analysed during this study are included in this published article, and are available from the corresponding author upon reasonable request. Author Contributions: S.G. and D.C.C. conceived the project. Y.-L.C. made the constructs, purified proteins, and performed crystallographic and biochemical experiments. S.M. carried out mitochondrial elongation assays. Y.C. performed ITC measurements and helped with collection of X-ray diffraction data. J.-X.F., B.Y. and Y.-J.L. performed cloning and purification for some of the MFN1IM mutants. D.-D.G. performed some of the SEC-RALS experiments, D.-D.G., J.-Y.Y. and S.L. helped with crystallization experiments. Y.-L.C., S.L. and S.G. solved the structures. Y.-L.C., D.C.C. and S.G. wrote the paper. The authors declare no competing financial interests. Reviewer Information: Nature thanks M. Ford and the other anonymous reviewer(s) for their contribution to the peer review of this work.

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Additional details

Created:
August 19, 2023
Modified:
October 23, 2023