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Published March 21, 2016 | Published + Supplemental Material
Journal Article Open

A mammalian enhancer trap resource for discovering and manipulating neuronal cell types

Abstract

There is a continuing need for driver strains to enable cell-type-specific manipulation in the nervous system. Each cell type expresses a unique set of genes, and recapitulating expression of marker genes by BAC transgenesis or knock-in has generated useful transgenic mouse lines. However, since genes are often expressed in many cell types, many of these lines have relatively broad expression patterns. We report an alternative transgenic approach capturing distal enhancers for more focused expression. We identified an enhancer trap probe often producing restricted reporter expression and developed efficient enhancer trap screening with the PiggyBac transposon. We established more than 200 lines and found many lines that label small subsets of neurons in brain substructures, including known and novel cell types. Images and other information about each line are available online (enhancertrap.bio.brandeis.edu).

Additional Information

© 2016 eLife Sciences. © 2016, Shima et al. This article is distributed under the terms of the Creative Commons Attribution License permitting unrestricted use and redistribution provided that the original author and source are credited. Received: 03 December 2015; Accepted: 18 March 2016; Published: 21 March 2016. The transgenic lines were generated at the Brandies University transgenic mouse facility. We are grateful to Frank Sangiorgi and Zhe Meng for transgenesis; Serena David and Rajani Shelke for virus production; Roman Pavlyuk, Hao Fan, Sumana Setty, Alexander Cristofalo, Sarah Pizzano, and Emi Kullberg for assistance in histology; Prakhar Sahay for developing scripts for the web site. This work was supported by the Human Frontier Science Program Long Term Fellowship to Y.S., the David and Lucile Packard Foundation to C.L., and EY022360, NS075007 and MH105949 to S.N. Author contributions: YS, Conception and design, Acquisition of data, Analysis and interpretation of data, Drafting or revising the article; KS, PT, Acquisition of data, Analysis and interpretation of data, Drafting or revising the article; CMH, Conception and design, Acquisition of data, Drafting or revising the article; MS, JBB, SM, Acquisition of data, Analysis and interpretation of data; CL, Conception and design, Drafting or revising the article, Contributed unpublished essential data or reagents; SBN, Conception and design, Analysis and interpretation of data, Drafting or revising the article. Ethics: Animal experimentation: This study was performed in strict accordance with the recommendations in the Guide for the Care and Use of Laboratory Animals of the National Institutes of Health. All of the animals were handled according to approved institutional animal care and use committee (IACUC) protocols (#14004) of Brandeis University. All surgery was performed under ketamine and xylazine anesthesia, and every effort was made to minimize suffering.

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Additional details

Created:
August 20, 2023
Modified:
October 18, 2023