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Published 2011 | Supplemental Material + Published
Journal Article Open

Structurally robust biological networks

Abstract

Background: The molecular circuitry of living organisms performs remarkably robust regulatory tasks, despite the often intrinsic variability of its components. A large body of research has in fact highlighted that robustness is often a structural property of biological systems. However, there are few systematic methods to mathematically model and describe structural robustness. With a few exceptions, numerical studies are often the preferred approach to this type of investigation. Results: In this paper, we propose a framework to analyze robust stability of equilibria in biological networks. We employ Lyapunov and invariant sets theory, focusing on the structure of ordinary differential equation models. Without resorting to extensive numerical simulations, often necessary to explore the behavior of a model in its parameter space, we provide rigorous proofs of robust stability of known bio-molecular networks. Our results are in line with existing literature. Conclusions: The impact of our results is twofold: on the one hand, we highlight that classical and simple control theory methods are extremely useful to characterize the behavior of biological networks analytically. On the other hand, we are able to demonstrate that some biological networks are robust thanks to their structure and some qualitative properties of the interactions, regardless of the specific values of their parameters.

Additional Information

© 2011 Blanchini and Franco; licensee BioMed Central Ltd. This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. Received: 10 November 2010 Accepted: 17 May 2011 Published: 17 May 2011. The authors acknowledge financial support by the National Science Foundation (NSF) grant CCF-0832824 (The Molecular Programming Project). We are grateful to R. M. Murray, for helpful advise and discussions, and to the Reviewers for their constructive comments. Authors' contributions: FB and EF performed research and wrote the paper.

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Published - Blanchini2011p14393BMC_Syst_Biol.pdf

Supplemental Material - 1752-0509-5-74-s1.pdf

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